Any change you make to the stock setup will change your speedo.
I can't help but think you're off now, but don't take my word for it, go here: http://www.12oclocklabs.com/sdrd_calc.htm
Type in what your bike had stock, and then type in what you have now, and BLAMMO .... you'll see how far off you really are.
_________________
2008 WR250X
Gearing: 13t - 48t
Power Commander 5 / PC-V
Airbox Door Removed - Flapper glued - AIS removed
FmF Q4
Bridgestone Battlax BT-003rs