I have an 08 wr250x, but a non-California model.
Original fuel pump and over 11,000 miles on her.
I've NEVER noticed a vacuum on the gas cap when removing it to put gas in.
Turn key, light twist on cap, remove and put gas in.
Sounds like you've got a clog somewhere.
The kind of vacuum you're describing does NOT sound normal for any motorcycle I've ever owned.
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2008 WR250X
Gearing: 13t - 48t
Power Commander 5 / PC-V
Airbox Door Removed - Flapper glued - AIS removed
FmF Q4
Bridgestone Battlax BT-003rs