You might have to plug the servo motor back in to clear codes.
From what I recall reading the transistor trick won't clear a code once it's thrown.
In order to reset - the servo must be plugged back in so the bike "knows" everything is okay.
Hope you didn't trash the servo motor.
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2008 WR250X
Gearing: 13t - 48t
Power Commander 5 / PC-V
Airbox Door Removed - Flapper glued - AIS removed
FmF Q4
Bridgestone Battlax BT-003rs