I'm new to the WR world and have bought a 2008 WR250R with AIS removed, Ultimate Air Box mod, Two stage Uni Filter with filter skin, GYTR pipe and EJK fuel controller.
The recommended settings for my set up by EJK were: 3, 2.5, 0.5, 4.5, 3.5, 2
I've tried that and some other settings from here and the recommended settings seem the best overall. I've added to the acceleration setting and the full throttle setting but that's it.
My settings are now: 3, 3, 1, 4.5, 3.5, 2.
Interesting to note that if cut out occurs EJK recommend going down to 3.5 when the common consensus is to go up to 5. And no amount of fuel adjustment will make your 250 into 450.